BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015B09LP1|AL426798
(1009 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1364 0.0
>3x_Contig1388
Length = 8256
Score = 1364 bits (686), Expect = 0.0
Identities = 701/708 (99%), Gaps = 1/708 (0%)
Strand = Plus / Minus
Query: 303 cacttccgcatcaggtacatcaggtacctcgggcactagcacactcataccacatggcaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4775 cacttccgcatcaggtacatcaggtacctcgggcactagcacactcataccacatggcaa 4716
Query: 363 ttcccaggatacagtagaccaaatggacccagaaccacactccaacgcgttggtgcgcct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4715 ttcccaggatacagtagaccaaatggacccagaaccacactccaacgcgttggtgcgcct 4656
Query: 423 cgaaccaaatcctttcgatccaaacgtcatcgtcaccgtcgcacaggacagtaacgccat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4655 cgaaccaaatcctttcgatccaaacgtcatcgtcaccgtcgcacaggacagtaacgccat 4596
Query: 483 catcgtactagacatgagataccctggaaccccattgcttaccctcgagggccacattgg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4595 catcgtactagacatgagataccctggaaccccattgcttaccctcgagggccacattgg 4536
Query: 543 acctgttaaccaagtacaatggcatccaaagaaatccggagtccttgtctcctgtggaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4535 acctgttaaccaagtacaatggcatccaaagaaatccggagtccttgtctcctgtggaga 4476
Query: 603 cgattgccaagttctgtactgggatacaagcgctctactggggcaaacctcgtccaacac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4475 cgattgccaagttctgtactgggatacaagcgctctactggggcaaacctcgtccaacac 4416
Query: 663 cgcgagatggaacaaccaaaacgtcgtacatactgtagacacaccacagatggcatacac 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4415 cgcgagatggaacaaccaaaacgtcgtacatactgtagacacaccacagatggcatacac 4356
Query: 723 cacggaaaccgaggcaaacaacctggtcctcaacccttctggtacccatgtaggtaccgt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4355 cacggaaaccgaggcaaacaacctggtcctcaacccttctggtacccatgtaggtaccgt 4296
Query: 783 taacggtaagaccttcacggcgatcaacttgaacacgtgatacgtaaatwatgctcagcg 842
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4295 taacggtaagaccttcacggcgatcaacttgaacacgtgatacgtaaataatgctcagcg 4236
Query: 843 ttttatatagtactttagtgtaatgaatg-aawcacgtgacaycctccccgatttctgay 901
||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||
Sbjct: 4235 ttttatatagtactttagtgtaatgaatgaaatcacgtgacatcctccccgatttctgac 4176
Query: 902 tctgctcgacacgttttctgacttgaaaagcgcacttgacccgaagatcagacccttcgc 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4175 tctgctcgacacgttttctgacttgaaaagcgcacttgacccgaagatcagacccttcgc 4116
Query: 962 caagtyaaaaccacaggataaaggccatcggcagcggaatcgatgaga 1009
||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4115 caagtcaaaaccacaggataaaggccatcggcagccgaatcgatgaga 4068
Score = 517 bits (260), Expect = e-146
Identities = 267/268 (99%), Gaps = 1/268 (0%)
Strand = Plus / Minus
Query: 1 gatctttcgaactctaccaactacgtaaagacgcaattgattgcacatgatagcgaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5080 gatctttcgaactctaccaactacgtaaagacgcaattgattgcacatgatagcgaagtg 5021
Query: 61 tntcgacgtgaaattcttggcacaatcgacgcagttgtttgccagctgcggtggtgatgg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5020 t-tcgacgtgaaattcttggcacaatcgacgcagttgtttgccagctgcggtggtgatgg 4962
Query: 121 atccgtcagagtgtttgacctcagatcactggcacacagtaccatcgtgtacgatcacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4961 atccgtcagagtgtttgacctcagatcactggcacacagtaccatcgtgtacgatcacgg 4902
Query: 181 gaacgagacttcacgcggctccagcggtggtggagcagcagcagcagatggtccaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4901 gaacgagacttcacgcggctccagcggtggtggagcagcagcagcagatggtccaaacaa 4842
Query: 241 aaacgcaaccacgaaagttactgcaaat 268
||||||||||||||||||||||||||||
Sbjct: 4841 aaacgcaaccacgaaagttactgcaaat 4814
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4336
Number of Sequences: 1807
Number of extensions: 4336
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 1009
length of database: 10,358,551
effective HSP length: 16
effective length of query: 993
effective length of database: 10,329,639
effective search space: 10257331527
effective search space used: 10257331527
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)